Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AL591424.1-201ENST00000442569 1213 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 KRT18P34-201ENST00000488218 1270 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AL078644.1-201ENST00000609881 752 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 BX640515.1-201ENST00000617215 977 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 IL9RP2-201ENST00000423948 1312 ntBASIC14.67□□□□□ -0.06
NPIPB4C9JG80 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AC093724.1-201ENST00000448659 1027 ntBASIC14.67□□□□□ -0.06
NPIPB4C9JG80 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 RPL13AP23-201ENST00000480739 586 ntBASIC14.67□□□□□ -0.06
NPIPB4C9JG80 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 KRT19P2-202ENST00000557173 1012 ntBASIC14.67□□□□□ -0.06
NPIPB4C9JG80 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AC004877.2-201ENST00000623941 599 ntBASIC14.67□□□□□ -0.06
NPIPB4C9JG80 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB4C9JG80 BCAR1-209ENST00000546196 1340 ntBASIC14.66□□□□□ -0.06
NPIPB4C9JG80 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AC025580.3-201ENST00000617932 1424 ntBASIC14.66□□□□□ -0.06
NPIPB4C9JG80 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms