Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 KRT8P39-201ENST00000396270 1433 ntBASIC25.69■■□□□ 1.7
ARID3CA6NKF2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 KRT8P12-202ENST00000472924 1397 ntBASIC25.69■■□□□ 1.7
ARID3CA6NKF2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC25.69■■□□□ 1.7
ARID3CA6NKF2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARID3CA6NKF2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC25.67■■□□□ 1.7
ARID3CA6NKF2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AC093724.1-201ENST00000448659 1027 ntBASIC25.67■■□□□ 1.7
ARID3CA6NKF2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AC061975.2-201ENST00000581722 295 ntBASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AC008735.3-201ENST00000596646 500 ntBASIC25.67■■□□□ 1.7
ARID3CA6NKF2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 COX11-210ENST00000639671 696 ntBASIC25.67■■□□□ 1.7
ARID3CA6NKF2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 PP12613-201ENST00000424958 2230 ntBASIC25.67■■□□□ 1.7
ARID3CA6NKF2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC25.67■■□□□ 1.7
ARID3CA6NKF2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 CDC14C-201ENST00000428251 1719 ntBASIC25.66■■□□□ 1.7
ARID3CA6NKF2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 SERBP1P3-201ENST00000459980 809 ntBASIC25.66■■□□□ 1.7
ARID3CA6NKF2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARID3CA6NKF2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 AL589702.1-201ENST00000641229 1509 ntBASIC25.65■■□□□ 1.7
ARID3CA6NKF2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 AC234783.1-201ENST00000441761 496 ntBASIC25.65■■□□□ 1.7
ARID3CA6NKF2 KRT223P-202ENST00000449164 1292 ntBASIC25.65■■□□□ 1.7
ARID3CA6NKF2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC25.65■■□□□ 1.7
ARID3CA6NKF2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms