Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 AC131212.1-201ENST00000613771 668 ntBASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 TMBIM7P-203ENST00000641617 1718 ntBASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 CICP23-201ENST00000605013 2741 ntBASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AC130371.2-201ENST00000619443 611 ntBASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 RALB-208ENST00000631312 311 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAPPC1Q9Y5R8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms