Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 SPCS2P1-201ENST00000561636 679 ntBASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 HYMAI-201ENST00000635591 3347 ntBASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 AL355312.1-201ENST00000407115 2176 ntBASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 AC140658.5-201ENST00000438532 169 ntBASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 AC015911.4-201ENST00000588022 1070 ntBASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA3Q9Y5H0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 AC026120.1-201ENST00000611536 926 ntBASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA3Q9Y5H0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA3Q9Y5H0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA3Q9Y5H0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA3Q9Y5H0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA3Q9Y5H0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA3Q9Y5H0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms