Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 AL603756.1-201ENST00000606511 2163 ntBASIC21.43■■□□□ 1.02
PDZRN3Q9UPQ7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 FAM207CP-201ENST00000443486 507 ntBASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDZRN3Q9UPQ7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 AC079328.2-201ENST00000561241 3354 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 TUBB3P1-201ENST00000405796 1332 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 TFAMP1-201ENST00000412727 736 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 AC079140.1-201ENST00000508039 487 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 AC005225.4-201ENST00000557330 545 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 PCDHB17P-201ENST00000539533 2393 ntBASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDZRN3Q9UPQ7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 PCDH8P1-201ENST00000428983 2773 ntBASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 KRT18P32-201ENST00000424695 1287 ntBASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 KLF2P3-201ENST00000451977 1087 ntBASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDZRN3Q9UPQ7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms