Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 MIR1233-2-201ENST00000408138 82 ntBASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 MIR1233-1-201ENST00000408722 82 ntBASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 AP001005.1-201ENST00000571755 1248 ntBASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CCM2LQ9NUG4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC233702.3-201ENST00000578656 1387 ntBASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 STK19B-204ENST00000512515 211 ntBASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC005332.3-201ENST00000589904 676 ntBASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 Z69720.1-201ENST00000601483 472 ntBASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCM2LQ9NUG4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AC099063.4-201ENST00000641099 1602 ntBASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AKR1C7P-201ENST00000305623 895 ntBASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms