Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 LINC01144-201ENST00000626198 1710 ntBASIC19.68■□□□□ 0.74
NEK1Q96PY6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 PMS2P4-201ENST00000412466 1052 ntBASIC19.67■□□□□ 0.74
NEK1Q96PY6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 AC021097.1-201ENST00000607902 574 ntBASIC19.67■□□□□ 0.74
NEK1Q96PY6 AC020765.3-201ENST00000613051 740 ntBASIC19.67■□□□□ 0.74
NEK1Q96PY6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEK1Q96PY6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NEK1Q96PY6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.66■□□□□ 0.74
NEK1Q96PY6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.66■□□□□ 0.74
NEK1Q96PY6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 KRT19P2-202ENST00000557173 1012 ntBASIC19.66■□□□□ 0.74
NEK1Q96PY6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEK1Q96PY6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NEK1Q96PY6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms