Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.64■□□□□ 0.41
CALR3Q96L12 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 MTDHP3-201ENST00000594186 672 ntBASIC17.64■□□□□ 0.41
CALR3Q96L12 AC138894.3-201ENST00000603787 634 ntBASIC17.64■□□□□ 0.41
CALR3Q96L12 GGTLC5P-201ENST00000617623 998 ntBASIC17.64■□□□□ 0.41
CALR3Q96L12 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.64■□□□□ 0.41
CALR3Q96L12 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 AC005052.1-201ENST00000625181 2492 ntBASIC17.64■□□□□ 0.41
CALR3Q96L12 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 PAUPAR-201ENST00000630360 2965 ntBASIC17.64■□□□□ 0.41
CALR3Q96L12 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 PCGF3-213ENST00000620529 1899 ntBASIC17.63■□□□□ 0.41
CALR3Q96L12 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CALR3Q96L12 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.63■□□□□ 0.41
CALR3Q96L12 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.63■□□□□ 0.41
CALR3Q96L12 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.63■□□□□ 0.41
CALR3Q96L12 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.63■□□□□ 0.41
CALR3Q96L12 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.63■□□□□ 0.41
CALR3Q96L12 AL121772.3-201ENST00000610840 674 ntBASIC17.63■□□□□ 0.41
CALR3Q96L12 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.63■□□□□ 0.41
CALR3Q96L12 AL358472.4-201ENST00000633140 710 ntBASIC17.63■□□□□ 0.41
CALR3Q96L12 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 AC129492.6-201ENST00000611383 1305 ntBASIC17.63■□□□□ 0.41
CALR3Q96L12 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CALR3Q96L12 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CALR3Q96L12 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CALR3Q96L12 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CALR3Q96L12 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.62■□□□□ 0.41
CALR3Q96L12 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.62■□□□□ 0.41
CALR3Q96L12 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 PTCHD3P3-201ENST00000403073 906 ntBASIC17.62■□□□□ 0.41
CALR3Q96L12 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.62■□□□□ 0.41
CALR3Q96L12 AC087641.1-201ENST00000557561 1021 ntBASIC17.62■□□□□ 0.41
CALR3Q96L12 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.62■□□□□ 0.41
CALR3Q96L12 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 AC006557.2-201ENST00000592985 1240 ntBASIC17.62■□□□□ 0.41
CALR3Q96L12 CYP2A7P1-201ENST00000595391 815 ntBASIC17.62■□□□□ 0.41
CALR3Q96L12 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CALR3Q96L12 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CALR3Q96L12 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms