Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 HMGA1P7-201ENST00000406908 502 ntBASIC16.94■□□□□ 0.3
RTP4Q96DX8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 AC092865.5-201ENST00000545435 363 ntBASIC16.94■□□□□ 0.3
RTP4Q96DX8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 AC145285.3-201ENST00000564603 959 ntBASIC16.94■□□□□ 0.3
RTP4Q96DX8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 AC046158.3-201ENST00000624947 2558 ntBASIC16.93■□□□□ 0.3
RTP4Q96DX8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 AC108751.1-201ENST00000490852 363 ntBASIC16.93■□□□□ 0.3
RTP4Q96DX8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 AC021097.1-201ENST00000607902 574 ntBASIC16.93■□□□□ 0.3
RTP4Q96DX8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 AC104109.2-201ENST00000602919 1418 ntBASIC16.93■□□□□ 0.3
RTP4Q96DX8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.93■□□□□ 0.3
RTP4Q96DX8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTP4Q96DX8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 AC092910.1-201ENST00000482027 1129 ntBASIC16.92■□□□□ 0.3
RTP4Q96DX8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 AL645728.2-201ENST00000641974 660 ntBASIC16.92■□□□□ 0.3
RTP4Q96DX8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.92■□□□□ 0.3
RTP4Q96DX8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTP4Q96DX8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 AL592424.1-201ENST00000563624 1536 ntBASIC16.91■□□□□ 0.3
RTP4Q96DX8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTP4Q96DX8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RTP4Q96DX8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms