Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HPS1Q92902 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
HPS1Q92902 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HPS1Q92902 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
HPS1Q92902 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HPS1Q92902 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HPS1Q92902 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
HPS1Q92902 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HPS1Q92902 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
HPS1Q92902 TSPY19P-201ENST00000418461 509 ntBASIC15.33■□□□□ 0.04
HPS1Q92902 TSPY18P-201ENST00000441642 509 ntBASIC15.33■□□□□ 0.04
HPS1Q92902 TOB2P1-201ENST00000469761 992 ntBASIC15.33■□□□□ 0.04
HPS1Q92902 AC091304.2-201ENST00000564639 760 ntBASIC15.33■□□□□ 0.04
HPS1Q92902 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.33■□□□□ 0.04
HPS1Q92902 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.33■□□□□ 0.04
HPS1Q92902 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.33■□□□□ 0.04
HPS1Q92902 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.33■□□□□ 0.04
HPS1Q92902 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HPS1Q92902 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HPS1Q92902 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HPS1Q92902 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HPS1Q92902 IGHGP-201ENST00000390555 1178 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 AL845331.1-201ENST00000424978 1190 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 VENTXP7-201ENST00000475503 772 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 AC104819.1-201ENST00000504587 486 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 GUSBP12-201ENST00000513727 720 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
HPS1Q92902 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.32■□□□□ 0.04
HPS1Q92902 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.32■□□□□ 0.04
HPS1Q92902 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.32■□□□□ 0.04
HPS1Q92902 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 Z69720.1-201ENST00000601483 472 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 BNIP3P41-202ENST00000616656 861 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.32■□□□□ 0.04
HPS1Q92902 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.32■□□□□ 0.04
HPS1Q92902 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS1Q92902 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS1Q92902 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms