Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 FLJ38576-201ENST00000623820 2459 ntBASIC23.11■■□□□ 1.29
TMC1Q8TDI8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMC1Q8TDI8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 FAM86GP-201ENST00000448322 971 ntBASIC23.1■■□□□ 1.29
TMC1Q8TDI8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 MIR3909-201ENST00000579518 119 ntBASIC23.1■■□□□ 1.29
TMC1Q8TDI8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 AL671710.1-201ENST00000610245 2349 ntBASIC23.1■■□□□ 1.29
TMC1Q8TDI8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.1■■□□□ 1.29
TMC1Q8TDI8 PCDHB17P-201ENST00000539533 2393 ntBASIC23.09■■□□□ 1.29
TMC1Q8TDI8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 SLC25A39P2-201ENST00000537614 270 ntBASIC23.09■■□□□ 1.29
TMC1Q8TDI8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 AL138918.1-201ENST00000568306 659 ntBASIC23.09■■□□□ 1.29
TMC1Q8TDI8 AC027307.2-201ENST00000591252 911 ntBASIC23.09■■□□□ 1.29
TMC1Q8TDI8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TMC1Q8TDI8 TUBB8P12-201ENST00000308911 1335 ntBASIC23.08■■□□□ 1.29
TMC1Q8TDI8 TUBB7P-202ENST00000428444 1305 ntBASIC23.08■■□□□ 1.29
TMC1Q8TDI8 TUBB8P7-204ENST00000567960 1332 ntBASIC23.08■■□□□ 1.29
TMC1Q8TDI8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMC1Q8TDI8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC23.08■■□□□ 1.29
TMC1Q8TDI8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
TMC1Q8TDI8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms