Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 AL671883.3-201ENST00000603274 991 ntBASIC17.77■□□□□ 0.44
LMO3Q8TAP4 AL078644.1-201ENST00000609881 752 ntBASIC17.77■□□□□ 0.44
LMO3Q8TAP4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.77■□□□□ 0.44
LMO3Q8TAP4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 AL592424.1-201ENST00000563624 1536 ntBASIC17.77■□□□□ 0.43
LMO3Q8TAP4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LMO3Q8TAP4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 AC093724.1-201ENST00000448659 1027 ntBASIC17.76■□□□□ 0.43
LMO3Q8TAP4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 AC068137.2-201ENST00000605408 478 ntBASIC17.76■□□□□ 0.43
LMO3Q8TAP4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 AC099522.2-201ENST00000607001 744 ntBASIC17.76■□□□□ 0.43
LMO3Q8TAP4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 AC016027.1-202ENST00000607927 1699 ntBASIC17.76■□□□□ 0.43
LMO3Q8TAP4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LMO3Q8TAP4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.75■□□□□ 0.43
LMO3Q8TAP4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.74■□□□□ 0.43
LMO3Q8TAP4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms