Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 PCGF3-213ENST00000620529 1899 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 RPSAP43-201ENST00000402237 625 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 UPF3AP3-201ENST00000420996 769 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 ADH5P3-201ENST00000433842 1137 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 KRT18P34-201ENST00000488218 1270 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 AC092865.5-201ENST00000545435 363 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 RARRES2P8-201ENST00000566335 367 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 AC005829.1-201ENST00000570002 483 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 AC010327.4-202ENST00000591484 748 ntBASIC17.03■□□□□ 0.32
RTL3Q8N8U3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL3Q8N8U3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 AL671277.1-201ENST00000429656 993 ntBASIC17.02■□□□□ 0.32
RTL3Q8N8U3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 MIR3687-2-201ENST00000577708 61 ntBASIC17.02■□□□□ 0.32
RTL3Q8N8U3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 MIR3687-1-201ENST00000614492 61 ntBASIC17.02■□□□□ 0.32
RTL3Q8N8U3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL3Q8N8U3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTL3Q8N8U3 ELL2P1-201ENST00000413990 1906 ntBASIC17.02■□□□□ 0.31
RTL3Q8N8U3 ALOX12P2-203ENST00000570921 1945 ntBASIC17.02■□□□□ 0.31
RTL3Q8N8U3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms