Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH20Q8N6Y1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 AC006277.1-201ENST00000624348 1610 ntBASIC17■□□□□ 0.31
PCDH20Q8N6Y1 LINC00895-201ENST00000629028 1637 ntBASIC17■□□□□ 0.31
PCDH20Q8N6Y1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 PMS2P4-201ENST00000412466 1052 ntBASIC17■□□□□ 0.31
PCDH20Q8N6Y1 AC254562.1-201ENST00000417586 456 ntBASIC17■□□□□ 0.31
PCDH20Q8N6Y1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17■□□□□ 0.31
PCDH20Q8N6Y1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 CICP6-201ENST00000457191 2729 ntBASIC17■□□□□ 0.31
PCDH20Q8N6Y1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH20Q8N6Y1 FLJ38576-201ENST00000623820 2459 ntBASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 AL355306.1-201ENST00000415580 579 ntBASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 RPS8P6-201ENST00000426177 609 ntBASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 DNAJB3-202ENST00000449667 1266 ntBASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 AP001160.2-201ENST00000596071 487 ntBASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH20Q8N6Y1 AC079328.2-201ENST00000561241 3354 ntBASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms