Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AC002056.1-201ENST00000395613 760 ntBASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AC112482.1-201ENST00000492080 688 ntBASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AC112191.1-201ENST00000523689 701 ntBASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AC092902.6-201ENST00000641783 218 ntBASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 AL662844.4-201ENST00000606367 2838 ntBASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.48■□□□□ 0.39
SCUBE3Q8IX30 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 AC010327.4-202ENST00000591484 748 ntBASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCUBE3Q8IX30 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 HTR5BP-201ENST00000430851 1154 ntBASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 DNAJB3-201ENST00000446806 729 ntBASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 ALG1L5P-201ENST00000482043 771 ntBASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 AC005829.1-201ENST00000570002 483 ntBASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms