Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 PKD1P1-201ENST00000458669 6805 ntBASIC17.93■□□□□ 0.46
HERC6Q8IVU3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 KRT8P49-201ENST00000604166 1432 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 AC112492.5-201ENST00000421897 457 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 ZNF890P-202ENST00000530367 1156 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 BANF1P1-201ENST00000553684 263 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 AC105021.1-202ENST00000570572 669 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 MIR4492-201ENST00000581627 80 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 AC008494.3-201ENST00000606615 944 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 SPTSSB-204ENST00000617024 1292 ntBASIC17.92■□□□□ 0.46
HERC6Q8IVU3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC6Q8IVU3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 MIR658-201ENST00000385210 100 ntBASIC17.91■□□□□ 0.46
HERC6Q8IVU3 AL080243.2-201ENST00000418783 582 ntBASIC17.91■□□□□ 0.46
HERC6Q8IVU3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 KRT17P8-201ENST00000540749 863 ntBASIC17.91■□□□□ 0.46
HERC6Q8IVU3 AL079307.3-201ENST00000556114 283 ntBASIC17.91■□□□□ 0.46
HERC6Q8IVU3 AC106886.1-201ENST00000568660 600 ntBASIC17.91■□□□□ 0.46
HERC6Q8IVU3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 CHCHD2P3-201ENST00000603038 451 ntBASIC17.91■□□□□ 0.46
HERC6Q8IVU3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms