Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.28■□□□□ 0.04
CDC42P60953 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC42P60953 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 TSPY5P-201ENST00000426936 936 ntBASIC15.28■□□□□ 0.04
CDC42P60953 AC117947.1-201ENST00000427448 529 ntBASIC15.28■□□□□ 0.04
CDC42P60953 TSPY22P-201ENST00000427496 604 ntBASIC15.28■□□□□ 0.04
CDC42P60953 AC246785.2-201ENST00000432512 513 ntBASIC15.28■□□□□ 0.04
CDC42P60953 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDC42P60953 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 NUS1P1-201ENST00000446295 882 ntBASIC15.28■□□□□ 0.04
CDC42P60953 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDC42P60953 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 HYMAI.1-201ENST00000620949 238 ntBASIC15.28■□□□□ 0.04
CDC42P60953 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.28■□□□□ 0.04
CDC42P60953 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC42P60953 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDC42P60953 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
CDC42P60953 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC42P60953 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC42P60953 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42P60953 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC42P60953 RNF152P1-201ENST00000397754 604 ntBASIC15.27■□□□□ 0.04
CDC42P60953 AL845331.1-201ENST00000424978 1190 ntBASIC15.27■□□□□ 0.04
CDC42P60953 AL137013.1-201ENST00000432946 1228 ntBASIC15.27■□□□□ 0.04
CDC42P60953 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.27■□□□□ 0.04
CDC42P60953 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.27■□□□□ 0.04
CDC42P60953 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.27■□□□□ 0.04
CDC42P60953 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.27■□□□□ 0.04
CDC42P60953 AC023824.1-201ENST00000562945 2975 ntBASIC15.27■□□□□ 0.04
CDC42P60953 AC011467.2-201ENST00000598425 242 ntBASIC15.27■□□□□ 0.04
CDC42P60953 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC42P60953 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC42P60953 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC42P60953 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDC42P60953 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC42P60953 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDC42P60953 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42P60953 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC42P60953 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDC42P60953 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42P60953 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42P60953 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.26■□□□□ 0.03
CDC42P60953 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDC42P60953 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDC42P60953 VENTXP7-201ENST00000475503 772 ntBASIC15.26■□□□□ 0.03
CDC42P60953 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42P60953 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42P60953 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDC42P60953 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 AL365209.1-201ENST00000624418 6473 ntBASIC15.26■□□□□ 0.03
CDC42P60953 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.26■□□□□ 0.03
CDC42P60953 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms