Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 AC002056.1-201ENST00000395613 760 ntBASIC19.04■□□□□ 0.64
CHMP4BP1P59074 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 AC023141.5-201ENST00000458585 616 ntBASIC19.04■□□□□ 0.64
CHMP4BP1P59074 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP4BP1P59074 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SPDYE11-202ENST00000450699 704 ntBASIC19.03■□□□□ 0.64
CHMP4BP1P59074 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SPDYE9P-201ENST00000570642 692 ntBASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SPDYE10P-202ENST00000612005 668 ntBASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SPDYE8P-202ENST00000612377 668 ntBASIC19.03■□□□□ 0.64
CHMP4BP1P59074 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP4BP1P59074 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 KRT8P48-201ENST00000515599 1220 ntBASIC19.02■□□□□ 0.64
CHMP4BP1P59074 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 AC026120.1-201ENST00000611536 926 ntBASIC19.02■□□□□ 0.64
CHMP4BP1P59074 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CHMP4BP1P59074 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CHMP4BP1P59074 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.63
CHMP4BP1P59074 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CHMP4BP1P59074 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP4BP1P59074 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.02■□□□□ 0.63
CHMP4BP1P59074 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP4BP1P59074 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms