Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN12P56749 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLDN12P56749 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 KRT8P49-201ENST00000604166 1432 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLDN12P56749 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN12P56749 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 AK4P3-201ENST00000418260 669 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.53□□□□□ -0.08
CLDN12P56749 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 AC090616.6-201ENST00000582640 721 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 AC011467.2-201ENST00000598425 242 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 AC006011.2-201ENST00000621313 1158 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN12P56749 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 AL136379.1-201ENST00000623471 2642 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN12P56749 AC006449.6-201ENST00000612330 2296 ntBASIC14.53□□□□□ -0.08
CLDN12P56749 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN12P56749 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLDN12P56749 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CLDN12P56749 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.52□□□□□ -0.08
CLDN12P56749 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CLDN12P56749 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN12P56749 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.52□□□□□ -0.08
CLDN12P56749 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN12P56749 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CLDN12P56749 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN12P56749 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 AC005521.1-201ENST00000393351 872 ntBASIC14.52□□□□□ -0.09
CLDN12P56749 ACTG1P4-201ENST00000425123 1122 ntBASIC14.52□□□□□ -0.09
CLDN12P56749 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 AC133561.5-201ENST00000635547 218 ntBASIC14.52□□□□□ -0.09
CLDN12P56749 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 AC097637.2-201ENST00000624096 1997 ntBASIC14.52□□□□□ -0.09
CLDN12P56749 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN12P56749 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLDN12P56749 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN12P56749 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
CLDN12P56749 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN12P56749 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLDN12P56749 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN12P56749 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN12P56749 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms