Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.44■□□□□ 0.22
CDKN2DP55273 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.44■□□□□ 0.22
CDKN2DP55273 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.44■□□□□ 0.22
CDKN2DP55273 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CDKN2DP55273 CXCL1P1-201ENST00000502804 216 ntBASIC16.44■□□□□ 0.22
CDKN2DP55273 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.44■□□□□ 0.22
CDKN2DP55273 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.44■□□□□ 0.22
CDKN2DP55273 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.44■□□□□ 0.22
CDKN2DP55273 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDKN2DP55273 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDKN2DP55273 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDKN2DP55273 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.44■□□□□ 0.22
CDKN2DP55273 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 HMGA1P7-201ENST00000406908 502 ntBASIC16.43■□□□□ 0.22
CDKN2DP55273 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.43■□□□□ 0.22
CDKN2DP55273 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 VN2R19P-201ENST00000442399 1052 ntBASIC16.43■□□□□ 0.22
CDKN2DP55273 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.43■□□□□ 0.22
CDKN2DP55273 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.43■□□□□ 0.22
CDKN2DP55273 RNA5SP415-201ENST00000517246 115 ntBASIC16.43■□□□□ 0.22
CDKN2DP55273 IGHV3-22-201ENST00000520721 359 ntBASIC16.43■□□□□ 0.22
CDKN2DP55273 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 AP001005.1-201ENST00000571755 1248 ntBASIC16.43■□□□□ 0.22
CDKN2DP55273 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 MIR4515-201ENST00000584082 81 ntBASIC16.43■□□□□ 0.22
CDKN2DP55273 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.43■□□□□ 0.22
CDKN2DP55273 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKN2DP55273 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDKN2DP55273 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CDKN2DP55273 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDKN2DP55273 LINC01144-201ENST00000626198 1710 ntBASIC16.42■□□□□ 0.22
CDKN2DP55273 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.42■□□□□ 0.22
CDKN2DP55273 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDKN2DP55273 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.42■□□□□ 0.22
CDKN2DP55273 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 REXO1L8P-201ENST00000604378 1897 ntBASIC16.42■□□□□ 0.22
CDKN2DP55273 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.42■□□□□ 0.22
CDKN2DP55273 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDKN2DP55273 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDKN2DP55273 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.42■□□□□ 0.22
CDKN2DP55273 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 CICP6-201ENST00000457191 2729 ntBASIC16.42■□□□□ 0.22
CDKN2DP55273 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.42■□□□□ 0.22
CDKN2DP55273 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 HLA-A-201ENST00000376802 1334 ntBASIC16.42■□□□□ 0.22
CDKN2DP55273 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDKN2DP55273 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKN2DP55273 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms