Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
AIF1P55008 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AIF1P55008 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AIF1P55008 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
AIF1P55008 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AIF1P55008 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.11■□□□□ 0.33
AIF1P55008 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AIF1P55008 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AIF1P55008 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.11■□□□□ 0.33
AIF1P55008 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 U82695.1-201ENST00000635752 1889 ntBASIC17.1■□□□□ 0.33
AIF1P55008 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 AP000347.1-202ENST00000435868 847 ntBASIC17.1■□□□□ 0.33
AIF1P55008 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 DNAJB3-201ENST00000446806 729 ntBASIC17.1■□□□□ 0.33
AIF1P55008 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.1■□□□□ 0.33
AIF1P55008 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.1■□□□□ 0.33
AIF1P55008 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
AIF1P55008 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 AC124067.4-201ENST00000519691 2379 ntBASIC17.1■□□□□ 0.33
AIF1P55008 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AIF1P55008 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
AIF1P55008 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AIF1P55008 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 AC006449.5-201ENST00000610658 2098 ntBASIC17.09■□□□□ 0.33
AIF1P55008 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
AIF1P55008 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
AIF1P55008 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.09■□□□□ 0.33
AIF1P55008 AC099398.1-201ENST00000567919 2776 ntBASIC17.09■□□□□ 0.33
AIF1P55008 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.09■□□□□ 0.33
AIF1P55008 AL355306.1-201ENST00000415580 579 ntBASIC17.09■□□□□ 0.33
AIF1P55008 FAM58CP-201ENST00000435741 640 ntBASIC17.09■□□□□ 0.33
AIF1P55008 AC093724.1-201ENST00000448659 1027 ntBASIC17.09■□□□□ 0.33
AIF1P55008 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 RN7SL589P-201ENST00000481268 310 ntBASIC17.09■□□□□ 0.33
AIF1P55008 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
AIF1P55008 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.09■□□□□ 0.33
AIF1P55008 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.09■□□□□ 0.33
AIF1P55008 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.09■□□□□ 0.33
AIF1P55008 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AIF1P55008 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.09■□□□□ 0.33
AIF1P55008 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AIF1P55008 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
AIF1P55008 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AIF1P55008 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.09■□□□□ 0.33
AIF1P55008 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
AIF1P55008 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms