Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TM4SF4P48230 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TM4SF4P48230 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF4P48230 AL354751.1-201ENST00000412768 1863 ntBASIC18.65■□□□□ 0.58
TM4SF4P48230 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF4P48230 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TM4SF4P48230 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF4P48230 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF4P48230 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.65■□□□□ 0.58
TM4SF4P48230 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF4P48230 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF4P48230 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF4P48230 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF4P48230 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.65■□□□□ 0.58
TM4SF4P48230 AL139011.1-202ENST00000642063 584 ntBASIC18.65■□□□□ 0.58
TM4SF4P48230 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TM4SF4P48230 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF4P48230 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF4P48230 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TM4SF4P48230 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TM4SF4P48230 CYP4F24P-201ENST00000586049 1580 ntBASIC18.64■□□□□ 0.58
TM4SF4P48230 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF4P48230 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF4P48230 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 BAATP1-201ENST00000412284 1225 ntBASIC18.64■□□□□ 0.57
TM4SF4P48230 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF4P48230 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF4P48230 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.64■□□□□ 0.57
TM4SF4P48230 IGHJ2P-201ENST00000454480 60 ntBASIC18.64■□□□□ 0.57
TM4SF4P48230 FAM86LP-201ENST00000478302 853 ntBASIC18.64■□□□□ 0.57
TM4SF4P48230 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF4P48230 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.64■□□□□ 0.57
TM4SF4P48230 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.64■□□□□ 0.57
TM4SF4P48230 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.64■□□□□ 0.57
TM4SF4P48230 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.64■□□□□ 0.57
TM4SF4P48230 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF4P48230 AL022328.3-201ENST00000607943 679 ntBASIC18.64■□□□□ 0.57
TM4SF4P48230 AC008687.7-202ENST00000637404 953 ntBASIC18.64■□□□□ 0.57
TM4SF4P48230 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF4P48230 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.64■□□□□ 0.57
TM4SF4P48230 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TM4SF4P48230 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.64■□□□□ 0.57
TM4SF4P48230 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TM4SF4P48230 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF4P48230 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF4P48230 BX323043.1-201ENST00000641006 1765 ntBASIC18.63■□□□□ 0.57
TM4SF4P48230 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 RPL13P2-201ENST00000440687 659 ntBASIC18.63■□□□□ 0.57
TM4SF4P48230 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF4P48230 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF4P48230 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.63■□□□□ 0.57
TM4SF4P48230 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.63■□□□□ 0.57
TM4SF4P48230 AL021578.1-201ENST00000613646 709 ntBASIC18.63■□□□□ 0.57
TM4SF4P48230 RHOXF1P1-202ENST00000635473 501 ntBASIC18.63■□□□□ 0.57
TM4SF4P48230 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.63■□□□□ 0.57
TM4SF4P48230 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TM4SF4P48230 AL136982.4-201ENST00000437689 1740 ntBASIC18.63■□□□□ 0.57
TM4SF4P48230 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
TM4SF4P48230 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms