Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.87■□□□□ 0.29
HADHAP40939 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
HADHAP40939 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.86■□□□□ 0.29
HADHAP40939 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.86■□□□□ 0.29
HADHAP40939 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.86■□□□□ 0.29
HADHAP40939 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.86■□□□□ 0.29
HADHAP40939 MIR4751-201ENST00000578027 74 ntBASIC16.86■□□□□ 0.29
HADHAP40939 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HADHAP40939 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HADHAP40939 AC079328.2-201ENST00000561241 3354 ntBASIC16.86■□□□□ 0.29
HADHAP40939 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 ME2P1-201ENST00000426028 1970 ntBASIC16.86■□□□□ 0.29
HADHAP40939 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HADHAP40939 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
HADHAP40939 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.85■□□□□ 0.29
HADHAP40939 MTHFR-217ENST00000641820 1569 ntBASIC16.85■□□□□ 0.29
HADHAP40939 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 AC131009.4-201ENST00000624048 1740 ntBASIC16.85■□□□□ 0.29
HADHAP40939 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 RNA5SP415-201ENST00000517246 115 ntBASIC16.85■□□□□ 0.29
HADHAP40939 AP001350.2-201ENST00000625104 1094 ntBASIC16.85■□□□□ 0.29
HADHAP40939 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.85■□□□□ 0.29
HADHAP40939 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.85■□□□□ 0.29
HADHAP40939 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.85■□□□□ 0.29
HADHAP40939 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HADHAP40939 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.85■□□□□ 0.29
HADHAP40939 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HADHAP40939 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HADHAP40939 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.84■□□□□ 0.29
HADHAP40939 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.84■□□□□ 0.29
HADHAP40939 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.84■□□□□ 0.29
HADHAP40939 CRYGEP-201ENST00000412192 528 ntBASIC16.84■□□□□ 0.29
HADHAP40939 HCG4-201ENST00000418983 998 ntBASIC16.84■□□□□ 0.29
HADHAP40939 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HADHAP40939 AC009947.1-201ENST00000444350 727 ntBASIC16.84■□□□□ 0.29
HADHAP40939 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.84■□□□□ 0.29
HADHAP40939 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.84■□□□□ 0.29
HADHAP40939 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HADHAP40939 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.84■□□□□ 0.29
HADHAP40939 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HADHAP40939 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms