Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.21■□□□□ 0.51
CLTAP09496 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.21■□□□□ 0.51
CLTAP09496 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 PMS2P4-201ENST00000412466 1052 ntBASIC18.21■□□□□ 0.51
CLTAP09496 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.21■□□□□ 0.51
CLTAP09496 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CLTAP09496 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLTAP09496 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.21■□□□□ 0.51
CLTAP09496 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLTAP09496 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLTAP09496 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.2■□□□□ 0.5
CLTAP09496 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CLTAP09496 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLTAP09496 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.2■□□□□ 0.5
CLTAP09496 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLTAP09496 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.2■□□□□ 0.5
CLTAP09496 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CLTAP09496 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.2■□□□□ 0.5
CLTAP09496 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 AC099522.2-201ENST00000607001 744 ntBASIC18.2■□□□□ 0.5
CLTAP09496 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.2■□□□□ 0.5
CLTAP09496 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.2■□□□□ 0.5
CLTAP09496 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLTAP09496 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.2■□□□□ 0.5
CLTAP09496 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CLTAP09496 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CLTAP09496 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CLTAP09496 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.19■□□□□ 0.5
CLTAP09496 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CLTAP09496 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLTAP09496 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.19■□□□□ 0.5
CLTAP09496 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 AC092474.2-201ENST00000424288 719 ntBASIC18.19■□□□□ 0.5
CLTAP09496 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.19■□□□□ 0.5
CLTAP09496 AL391256.1-201ENST00000443260 1855 ntBASIC18.19■□□□□ 0.5
CLTAP09496 AP006288.1-201ENST00000446065 395 ntBASIC18.19■□□□□ 0.5
CLTAP09496 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.19■□□□□ 0.5
CLTAP09496 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.19■□□□□ 0.5
CLTAP09496 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms