Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 AC092474.2-201ENST00000424288 719 ntBASIC16.85■□□□□ 0.29
HLA-DQB2P05538 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 AC020765.3-201ENST00000613051 740 ntBASIC16.84■□□□□ 0.29
HLA-DQB2P05538 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB2P05538 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DQB2P05538 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DQB2P05538 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
HLA-DQB2P05538 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 PMS2P7-201ENST00000506558 1336 ntBASIC16.83■□□□□ 0.28
HLA-DQB2P05538 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 AC002347.1-201ENST00000569543 541 ntBASIC16.83■□□□□ 0.28
HLA-DQB2P05538 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB2P05538 AC099522.2-201ENST00000607001 744 ntBASIC16.83■□□□□ 0.28
HLA-DQB2P05538 AC016027.1-202ENST00000607927 1699 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms