Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CAPNS1P04632 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPNS1P04632 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPNS1P04632 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPNS1P04632 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPNS1P04632 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPNS1P04632 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CAPNS1P04632 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 PKD1P1-201ENST00000458669 6805 ntBASIC16.59■□□□□ 0.25
CAPNS1P04632 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPNS1P04632 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CAPNS1P04632 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CAPNS1P04632 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.58■□□□□ 0.25
CAPNS1P04632 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.58■□□□□ 0.25
CAPNS1P04632 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.58■□□□□ 0.25
CAPNS1P04632 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.58■□□□□ 0.24
CAPNS1P04632 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CAPNS1P04632 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CAPNS1P04632 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.58■□□□□ 0.24
CAPNS1P04632 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.58■□□□□ 0.24
CAPNS1P04632 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 AL512356.2-201ENST00000546955 174 ntBASIC16.58■□□□□ 0.24
CAPNS1P04632 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.58■□□□□ 0.24
CAPNS1P04632 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.58■□□□□ 0.24
CAPNS1P04632 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.58■□□□□ 0.24
CAPNS1P04632 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CAPNS1P04632 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.58■□□□□ 0.24
CAPNS1P04632 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CAPNS1P04632 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CAPNS1P04632 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPNS1P04632 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPNS1P04632 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CAPNS1P04632 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 RNF216P1-203ENST00000404404 2427 ntBASIC16.57■□□□□ 0.24
CAPNS1P04632 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPNS1P04632 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC103564.2-201ENST00000432853 1299 ntBASIC16.57■□□□□ 0.24
CAPNS1P04632 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPNS1P04632 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPNS1P04632 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPNS1P04632 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.57■□□□□ 0.24
CAPNS1P04632 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CAPNS1P04632 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPNS1P04632 AC105917.1-201ENST00000506637 2539 ntBASIC16.57■□□□□ 0.24
CAPNS1P04632 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms