Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 AC141586.5-201ENST00000624546 2050 ntBASIC18.28■□□□□ 0.52
CD4P01730 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.28■□□□□ 0.52
CD4P01730 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CD4P01730 GNAQP1-201ENST00000444815 1067 ntBASIC18.28■□□□□ 0.52
CD4P01730 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.28■□□□□ 0.52
CD4P01730 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 AC105021.1-202ENST00000570572 669 ntBASIC18.28■□□□□ 0.52
CD4P01730 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.28■□□□□ 0.52
CD4P01730 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CD4P01730 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CD4P01730 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CD4P01730 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CD4P01730 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 AC073439.1-201ENST00000624121 1774 ntBASIC18.27■□□□□ 0.52
CD4P01730 BTBD7P1-201ENST00000447253 1453 ntBASIC18.27■□□□□ 0.52
CD4P01730 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CD4P01730 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CD4P01730 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.27■□□□□ 0.52
CD4P01730 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.27■□□□□ 0.52
CD4P01730 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
CD4P01730 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.27■□□□□ 0.52
CD4P01730 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 AL080243.2-201ENST00000418783 582 ntBASIC18.27■□□□□ 0.52
CD4P01730 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.27■□□□□ 0.52
CD4P01730 DFFBP1-201ENST00000433250 979 ntBASIC18.27■□□□□ 0.52
CD4P01730 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.27■□□□□ 0.52
CD4P01730 INE1-201ENST00000456273 945 ntBASIC18.27■□□□□ 0.52
CD4P01730 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CD4P01730 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
CD4P01730 AC135586.1-201ENST00000539323 574 ntBASIC18.27■□□□□ 0.52
CD4P01730 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CD4P01730 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CD4P01730 PKD1P1-201ENST00000458669 6805 ntBASIC18.27■□□□□ 0.52
CD4P01730 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD4P01730 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CD4P01730 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.27■□□□□ 0.51
CD4P01730 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CD4P01730 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CD4P01730 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CD4P01730 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD4P01730 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD4P01730 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
CD4P01730 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.26■□□□□ 0.51
CD4P01730 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CD4P01730 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.26■□□□□ 0.51
CD4P01730 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.26■□□□□ 0.51
CD4P01730 AC098859.1-201ENST00000502915 1238 ntBASIC18.26■□□□□ 0.51
CD4P01730 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 AL079307.3-201ENST00000556114 283 ntBASIC18.26■□□□□ 0.51
CD4P01730 AC104794.3-201ENST00000566840 1248 ntBASIC18.26■□□□□ 0.51
CD4P01730 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.26■□□□□ 0.51
CD4P01730 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.26■□□□□ 0.51
CD4P01730 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.26■□□□□ 0.51
CD4P01730 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CD4P01730 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms