Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TIMP1P01033 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TIMP1P01033 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMP1P01033 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 AL354751.1-201ENST00000412768 1863 ntBASIC17.75■□□□□ 0.43
TIMP1P01033 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.75■□□□□ 0.43
TIMP1P01033 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TIMP1P01033 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TIMP1P01033 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TIMP1P01033 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMP1P01033 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TIMP1P01033 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TIMP1P01033 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 FO393414.2-201ENST00000405153 598 ntBASIC17.75■□□□□ 0.43
TIMP1P01033 AC099336.1-201ENST00000417053 1171 ntBASIC17.75■□□□□ 0.43
TIMP1P01033 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMP1P01033 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.75■□□□□ 0.43
TIMP1P01033 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 AC103810.3-201ENST00000583567 96 ntBASIC17.75■□□□□ 0.43
TIMP1P01033 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.75■□□□□ 0.43
TIMP1P01033 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.75■□□□□ 0.43
TIMP1P01033 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP1P01033 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.75■□□□□ 0.43
TIMP1P01033 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
TIMP1P01033 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
TIMP1P01033 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TIMP1P01033 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TIMP1P01033 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
TIMP1P01033 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMP1P01033 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMP1P01033 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.74■□□□□ 0.43
TIMP1P01033 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TIMP1P01033 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.74■□□□□ 0.43
TIMP1P01033 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.74■□□□□ 0.43
TIMP1P01033 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMP1P01033 RN7SL399P-201ENST00000471648 279 ntBASIC17.74■□□□□ 0.43
TIMP1P01033 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.74■□□□□ 0.43
TIMP1P01033 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMP1P01033 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMP1P01033 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.74■□□□□ 0.43
TIMP1P01033 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMP1P01033 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMP1P01033 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMP1P01033 KRT8P22-201ENST00000562317 1415 ntBASIC17.73■□□□□ 0.43
TIMP1P01033 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMP1P01033 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TIMP1P01033 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TIMP1P01033 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMP1P01033 ACTG1P3-201ENST00000431775 1114 ntBASIC17.73■□□□□ 0.43
TIMP1P01033 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.73■□□□□ 0.43
TIMP1P01033 CSF2RBP1-201ENST00000447905 391 ntBASIC17.73■□□□□ 0.43
TIMP1P01033 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.73■□□□□ 0.43
TIMP1P01033 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMP1P01033 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMP1P01033 AL022328.1-201ENST00000610050 478 ntBASIC17.73■□□□□ 0.43
TIMP1P01033 AC244093.1-201ENST00000610837 814 ntBASIC17.73■□□□□ 0.43
TIMP1P01033 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMP1P01033 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TIMP1P01033 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TIMP1P01033 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMP1P01033 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMP1P01033 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMP1P01033 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMP1P01033 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TIMP1P01033 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMP1P01033 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TIMP1P01033 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TIMP1P01033 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TIMP1P01033 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms