Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC144AA2RUR9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC144AA2RUR9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC144AA2RUR9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AC010336.2-201ENST00000564226 506 ntBASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AC004840.1-201ENST00000636359 365 ntBASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AC063926.2-201ENST00000623766 1308 ntBASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 AL512361.1-201ENST00000554200 418 ntBASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144AA2RUR9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144AA2RUR9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 LETM1P2-201ENST00000597330 2178 ntBASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 SPDYE22P-201ENST00000582158 798 ntBASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CCDC144AA2RUR9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC23.64■■□□□ 1.38
CCDC144AA2RUR9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC23.64■■□□□ 1.37
CCDC144AA2RUR9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC144AA2RUR9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms