Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC243562.1-201ENST00000560672 389 ntBASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC005829.1-201ENST00000570002 483 ntBASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 REXO1L8P-201ENST00000604378 1897 ntBASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC092364.2-201ENST00000596710 2692 ntBASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 RPSAP43-201ENST00000402237 625 ntBASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 RN7SL589P-201ENST00000481268 310 ntBASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL662844.4-201ENST00000606367 2838 ntBASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL592424.1-201ENST00000563624 1536 ntBASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 UPF3AP3-201ENST00000420996 769 ntBASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms