Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ALG1L5P-201ENST00000482043 771 ntBASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 YBX1P5-201ENST00000509441 847 ntBASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 AL512652.2-201ENST00000625156 1716 ntBASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.16■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 RNU1-129P-201ENST00000384064 167 ntBASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MIR3909-201ENST00000579518 119 ntBASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 U1.21-201ENST00000580816 167 ntBASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 AP001160.2-201ENST00000596071 487 ntBASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TNFSF12-TNFSF13A0A0A6YY99 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AC211486.1-202ENST00000416371 468 ntBASIC15.14■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms