Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 TREML5P-201ENST00000421694 576 ntBASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1G3Q9Y6M4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 FAM207CP-201ENST00000443486 507 ntBASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 AL138918.1-201ENST00000568306 659 ntBASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1G3Q9Y6M4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 LINC02012-201ENST00000608206 1725 ntBASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 AL023806.1-201ENST00000603994 1649 ntBASIC16.27■□□□□ 0.19
CSNK1G3Q9Y6M4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1G3Q9Y6M4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms