Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42BPBQ9Y5S2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42BPBQ9Y5S2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42BPBQ9Y5S2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42BPBQ9Y5S2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 PDIA3P1-201ENST00000471856 1510 ntBASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CDC42BPBQ9Y5S2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 BRI3BPP1-201ENST00000594224 787 ntBASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 AL365330.1-201ENST00000607459 531 ntBASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 AC133552.6-201ENST00000613406 534 ntBASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CDC42BPBQ9Y5S2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC24.68■■□□□ 1.54
CDC42BPBQ9Y5S2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 GGT3P-204ENST00000453783 1664 ntBASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC24.67■■□□□ 1.54
CDC42BPBQ9Y5S2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 AL442647.2-201ENST00000429864 857 ntBASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 AL162726.2-201ENST00000438986 1017 ntBASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 AL033527.5-201ENST00000641382 801 ntBASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 AC068880.1-201ENST00000507289 2297 ntBASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42BPBQ9Y5S2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms