Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 REXO1L6P-201ENST00000603433 1515 ntBASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 SNX29P1-201ENST00000548357 1007 ntBASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTCBQ9Y3I0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.77■□□□□ 0.91
RTCBQ9Y3I0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.77■□□□□ 0.91
RTCBQ9Y3I0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTCBQ9Y3I0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTCBQ9Y3I0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 RRP7BP-205ENST00000566851 833 ntBASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 MIR4525-201ENST00000580000 75 ntBASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 AC008735.3-201ENST00000596646 500 ntBASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 TMEM261P1-201ENST00000604899 340 ntBASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCBQ9Y3I0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AC092337.1-201ENST00000568699 1129 ntBASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 AL033527.5-201ENST00000641382 801 ntBASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RTCBQ9Y3I0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms