Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC016027.1-202ENST00000607927 1699 ntBASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 DOC2GP-204ENST00000639052 2548 ntBASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.47■□□□□ 0.55
BLOC1S4Q9NUP1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 AL078644.1-201ENST00000609881 752 ntBASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 MTHFR-217ENST00000641820 1569 ntBASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S4Q9NUP1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
BLOC1S4Q9NUP1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
BLOC1S4Q9NUP1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.46■□□□□ 0.54
BLOC1S4Q9NUP1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 MCCD1P2-201ENST00000423228 335 ntBASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 POU5F1P6-201ENST00000466990 990 ntBASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S4Q9NUP1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms