Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 TCAF2P1-201ENST00000291129 2421 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 FLJ13224-201ENST00000313737 1514 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AP002414.1-201ENST00000391405 1147 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AL031058.1-201ENST00000561592 888 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AC083964.1-201ENST00000607549 630 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AC024909.3-201ENST00000611513 2257 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 AL603756.1-201ENST00000606511 2163 ntBASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF1Q9H7N4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AC144831.1-201ENST00000573312 2656 ntBASIC25■■□□□ 1.59
SCAF1Q9H7N4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 AC079776.2-201ENST00000641154 1609 ntBASIC25■■□□□ 1.59
SCAF1Q9H7N4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC25■■□□□ 1.59
SCAF1Q9H7N4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF1Q9H7N4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms