Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 AL355306.1-201ENST00000415580 579 ntBASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 AL009183.1-201ENST00000603760 355 ntBASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 AL031055.1-201ENST00000606362 631 ntBASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 NFIC-211ENST00000641145 8399 ntBASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 RNU1-129P-201ENST00000384064 167 ntBASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AL671277.1-201ENST00000429656 993 ntBASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 RN7SL589P-201ENST00000481268 310 ntBASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AC109635.5-201ENST00000533593 962 ntBASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 U1.21-201ENST00000580816 167 ntBASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.91□□□□□ -0.18
SSBP3Q9BWW4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 AC092068.3-201ENST00000587894 2016 ntBASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 UBALD1-205ENST00000590891 2641 ntBASIC13.9□□□□□ -0.18
SSBP3Q9BWW4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms