Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 AL590627.1-203ENST00000421194 1026 ntBASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 AC120114.3-201ENST00000611923 658 ntBASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 AC079328.2-201ENST00000561241 3354 ntBASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1CQ9BQE3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 AC093909.1-201ENST00000504731 1122 ntBASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 AL049840.3-201ENST00000602669 611 ntBASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 MIR7706-201ENST00000613747 67 ntBASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 FAM215A-202ENST00000632077 792 ntBASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 AC006058.4-201ENST00000624016 1670 ntBASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1CQ9BQE3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 RPS2P1-201ENST00000434010 821 ntBASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 BX005266.1-201ENST00000473402 457 ntBASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 AC025062.2-201ENST00000605477 670 ntBASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 BX640515.1-201ENST00000617215 977 ntBASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 AC073592.5-201ENST00000624854 528 ntBASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1CQ9BQE3 AC079776.2-201ENST00000641154 1609 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms