Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN18Q99952 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN18Q99952 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 KRT43P-201ENST00000434019 910 ntBASIC18.83■□□□□ 0.6
PTPN18Q99952 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.83■□□□□ 0.6
PTPN18Q99952 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN18Q99952 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN18Q99952 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN18Q99952 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PTPN18Q99952 AC074044.1-201ENST00000609673 707 ntBASIC18.83■□□□□ 0.6
PTPN18Q99952 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.83■□□□□ 0.6
PTPN18Q99952 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN18Q99952 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PTPN18Q99952 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN18Q99952 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPN18Q99952 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN18Q99952 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN18Q99952 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PTPN18Q99952 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN18Q99952 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PTPN18Q99952 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN18Q99952 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 AC004945.1-201ENST00000416738 983 ntBASIC18.82■□□□□ 0.6
PTPN18Q99952 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPN18Q99952 HIST3H2BA-201ENST00000436555 524 ntBASIC18.82■□□□□ 0.6
PTPN18Q99952 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPN18Q99952 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPN18Q99952 AC124947.2-201ENST00000547118 1133 ntBASIC18.82■□□□□ 0.6
PTPN18Q99952 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPN18Q99952 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPN18Q99952 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PTPN18Q99952 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN18Q99952 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN18Q99952 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN18Q99952 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 AL138688.1-201ENST00000624851 1594 ntBASIC18.81■□□□□ 0.6
PTPN18Q99952 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN18Q99952 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.81■□□□□ 0.6
PTPN18Q99952 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 TIMM17BP1-201ENST00000545713 516 ntBASIC18.81■□□□□ 0.6
PTPN18Q99952 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN18Q99952 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN18Q99952 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN18Q99952 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN18Q99952 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN18Q99952 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 TUBB1P2-201ENST00000422712 1306 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 TUBB1P1-201ENST00000503144 1300 ntBASIC18.8■□□□□ 0.6
PTPN18Q99952 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPN18Q99952 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN18Q99952 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN18Q99952 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN18Q99952 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN18Q99952 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN18Q99952 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN18Q99952 KLF2P4-201ENST00000451959 1225 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms