Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 PRORSD1P-201ENST00000295112 541 ntBASIC15.74■□□□□ 0.11
NR1H4Q96RI1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 MESTP1-201ENST00000404287 994 ntBASIC15.74■□□□□ 0.11
NR1H4Q96RI1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.74■□□□□ 0.11
NR1H4Q96RI1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 PRAL-201ENST00000624952 3286 ntBASIC15.73■□□□□ 0.11
NR1H4Q96RI1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 MFAP1P1-201ENST00000442257 1255 ntBASIC15.73■□□□□ 0.11
NR1H4Q96RI1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 AC097488.1-201ENST00000507834 756 ntBASIC15.73■□□□□ 0.11
NR1H4Q96RI1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H4Q96RI1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 AL391807.1-203ENST00000604392 2365 ntBASIC15.72■□□□□ 0.11
NR1H4Q96RI1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 MYCLP1-201ENST00000372451 1075 ntBASIC15.72■□□□□ 0.11
NR1H4Q96RI1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 MIR4674-201ENST00000582457 87 ntBASIC15.72■□□□□ 0.11
NR1H4Q96RI1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms