Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 CYP2T1P-202ENST00000641596 2535 ntBASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSPG4P5Q96PW8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 AC140113.2-201ENST00000604370 208 ntBASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 AC027601.4-201ENST00000611259 610 ntBASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CSPG4P5Q96PW8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CSPG4P5Q96PW8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
CSPG4P5Q96PW8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CSPG4P5Q96PW8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 DOC2GP-204ENST00000639052 2548 ntBASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 LINC01144-201ENST00000626198 1710 ntBASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 MED15P5-201ENST00000423150 992 ntBASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 AC020765.3-201ENST00000613051 740 ntBASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSPG4P5Q96PW8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms