Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 AC004461.1-201ENST00000412461 403 ntBASIC17.57■□□□□ 0.4
ATP2A3Q93084 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 AC107918.2-201ENST00000530817 355 ntBASIC17.57■□□□□ 0.4
ATP2A3Q93084 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 AC022145.2-201ENST00000598203 171 ntBASIC17.57■□□□□ 0.4
ATP2A3Q93084 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.56■□□□□ 0.4
ATP2A3Q93084 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 AC140658.5-201ENST00000438532 169 ntBASIC17.56■□□□□ 0.4
ATP2A3Q93084 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 FAM86C2P-203ENST00000528684 1004 ntBASIC17.56■□□□□ 0.4
ATP2A3Q93084 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.56■□□□□ 0.4
ATP2A3Q93084 AC106028.4-201ENST00000614509 607 ntBASIC17.56■□□□□ 0.4
ATP2A3Q93084 AC093028.1-201ENST00000622998 982 ntBASIC17.56■□□□□ 0.4
ATP2A3Q93084 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ATP2A3Q93084 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A3Q93084 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.55■□□□□ 0.4
ATP2A3Q93084 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 SLC25A1P3-201ENST00000395415 828 ntBASIC17.55■□□□□ 0.4
ATP2A3Q93084 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 AC004449.1-201ENST00000564240 433 ntBASIC17.55■□□□□ 0.4
ATP2A3Q93084 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A3Q93084 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ATP2A3Q93084 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms