Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DDX1Q92499 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX1Q92499 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX1Q92499 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX1Q92499 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX1Q92499 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX1Q92499 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 RNU1-129P-201ENST00000384064 167 ntBASIC17.71■□□□□ 0.43
DDX1Q92499 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 AC007967.2-201ENST00000432613 625 ntBASIC17.71■□□□□ 0.43
DDX1Q92499 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.71■□□□□ 0.43
DDX1Q92499 YBX1P5-201ENST00000509441 847 ntBASIC17.71■□□□□ 0.43
DDX1Q92499 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX1Q92499 AC096734.2-201ENST00000562054 433 ntBASIC17.71■□□□□ 0.43
DDX1Q92499 U1.21-201ENST00000580816 167 ntBASIC17.71■□□□□ 0.43
DDX1Q92499 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX1Q92499 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DDX1Q92499 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX1Q92499 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DDX1Q92499 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DDX1Q92499 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX1Q92499 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX1Q92499 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX1Q92499 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
DDX1Q92499 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.71■□□□□ 0.42
DDX1Q92499 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DDX1Q92499 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDX1Q92499 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 PCGF3-213ENST00000620529 1899 ntBASIC17.7■□□□□ 0.42
DDX1Q92499 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 AC023274.1-201ENST00000418278 595 ntBASIC17.7■□□□□ 0.42
DDX1Q92499 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 AL513480.1-201ENST00000451731 511 ntBASIC17.7■□□□□ 0.42
DDX1Q92499 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.7■□□□□ 0.42
DDX1Q92499 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX1Q92499 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX1Q92499 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX1Q92499 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 AL645728.2-201ENST00000641974 660 ntBASIC17.7■□□□□ 0.42
DDX1Q92499 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DDX1Q92499 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX1Q92499 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX1Q92499 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX1Q92499 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DDX1Q92499 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX1Q92499 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
DDX1Q92499 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX1Q92499 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms