Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 AL591424.1-201ENST00000442569 1213 ntBASIC14.61□□□□□ -0.07
CPEB3Q8NE35 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 AC018845.2-201ENST00000568326 409 ntBASIC14.61□□□□□ -0.07
CPEB3Q8NE35 MIR4515-201ENST00000584082 81 ntBASIC14.61□□□□□ -0.07
CPEB3Q8NE35 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.61□□□□□ -0.07
CPEB3Q8NE35 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 AL139011.1-202ENST00000642063 584 ntBASIC14.61□□□□□ -0.07
CPEB3Q8NE35 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 AC012569.1-201ENST00000591191 1524 ntBASIC14.61□□□□□ -0.07
CPEB3Q8NE35 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CPEB3Q8NE35 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AC006538.1-201ENST00000567905 1585 ntBASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AC140113.2-201ENST00000604370 208 ntBASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AC027601.4-201ENST00000611259 610 ntBASIC14.6□□□□□ -0.07
CPEB3Q8NE35 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPEB3Q8NE35 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 HMGA1P7-201ENST00000406908 502 ntBASIC14.59□□□□□ -0.07
CPEB3Q8NE35 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 KRT18P58-201ENST00000527480 1120 ntBASIC14.59□□□□□ -0.07
CPEB3Q8NE35 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.59□□□□□ -0.07
CPEB3Q8NE35 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms