Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RAB43P1-201ENST00000561790 589 ntBASIC17.04■□□□□ 0.32
SIX5Q8N196 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.04■□□□□ 0.32
SIX5Q8N196 AC046158.3-201ENST00000624947 2558 ntBASIC17.04■□□□□ 0.32
SIX5Q8N196 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
SIX5Q8N196 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SIX5Q8N196 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SIX5Q8N196 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.03■□□□□ 0.32
SIX5Q8N196 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SIX5Q8N196 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX5Q8N196 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.03■□□□□ 0.32
SIX5Q8N196 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SIX5Q8N196 KRT18P34-201ENST00000488218 1270 ntBASIC17.03■□□□□ 0.32
SIX5Q8N196 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.03■□□□□ 0.32
SIX5Q8N196 AC073389.1-201ENST00000595595 795 ntBASIC17.03■□□□□ 0.32
SIX5Q8N196 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX5Q8N196 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX5Q8N196 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX5Q8N196 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.03■□□□□ 0.32
SIX5Q8N196 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.03■□□□□ 0.32
SIX5Q8N196 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.03■□□□□ 0.32
SIX5Q8N196 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SIX5Q8N196 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX5Q8N196 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.32
SIX5Q8N196 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.02■□□□□ 0.32
SIX5Q8N196 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SIX5Q8N196 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.02■□□□□ 0.32
SIX5Q8N196 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.02■□□□□ 0.32
SIX5Q8N196 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SIX5Q8N196 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
SIX5Q8N196 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
SIX5Q8N196 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.02■□□□□ 0.32
SIX5Q8N196 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SIX5Q8N196 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.02■□□□□ 0.32
SIX5Q8N196 AC008494.3-201ENST00000606615 944 ntBASIC17.02■□□□□ 0.32
SIX5Q8N196 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX5Q8N196 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
SIX5Q8N196 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX5Q8N196 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.02■□□□□ 0.31
SIX5Q8N196 AL391825.1-201ENST00000457671 1364 ntBASIC17.02■□□□□ 0.31
SIX5Q8N196 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.02■□□□□ 0.31
SIX5Q8N196 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.02■□□□□ 0.31
SIX5Q8N196 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SIX5Q8N196 AC131009.4-201ENST00000624048 1740 ntBASIC17.01■□□□□ 0.31
SIX5Q8N196 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX5Q8N196 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SIX5Q8N196 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SIX5Q8N196 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.01■□□□□ 0.31
SIX5Q8N196 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.01■□□□□ 0.31
SIX5Q8N196 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.01■□□□□ 0.31
SIX5Q8N196 AC021097.1-201ENST00000607902 574 ntBASIC17.01■□□□□ 0.31
SIX5Q8N196 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms