Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 MIR1199-201ENST00000621445 119 ntBASIC15.67■□□□□ 0.1
CCDC71Q8IV32 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC71Q8IV32 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 MYCLP1-201ENST00000372451 1075 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AC023274.1-201ENST00000418278 595 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 GPX1P2-201ENST00000429271 606 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AC112482.1-201ENST00000492080 688 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AC122714.2-201ENST00000502787 707 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AC040169.1-201ENST00000565382 521 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AC005593.1-201ENST00000624894 515 ntBASIC15.66■□□□□ 0.1
CCDC71Q8IV32 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC71Q8IV32 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AC109462.3-201ENST00000573934 613 ntBASIC15.65■□□□□ 0.1
CCDC71Q8IV32 MIR3687-2-201ENST00000577708 61 ntBASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 MIR3687-1-201ENST00000614492 61 ntBASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AD001527.2-201ENST00000622994 785 ntBASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AC073592.5-201ENST00000624854 528 ntBASIC15.65■□□□□ 0.1
CCDC71Q8IV32 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms