Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 SNX33P1-201ENST00000592116 1762 ntBASIC11.41□□□□□ -0.58
CSMD3Q7Z407 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 EML3-217ENST00000531557 2509 ntTSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 CTBP2P5-201ENST00000454986 1264 ntBASIC11.41□□□□□ -0.58
CSMD3Q7Z407 SLC25A47P1-201ENST00000531577 414 ntBASIC11.41□□□□□ -0.58
CSMD3Q7Z407 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.41□□□□□ -0.58
CSMD3Q7Z407 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CSMD3Q7Z407 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC025048.3-201ENST00000590609 569 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AP001350.2-201ENST00000625104 1094 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC005229.1-201ENST00000392885 409 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC108725.1-201ENST00000495472 409 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AL138781.2-201ENST00000617896 1843 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 BOC-212ENST00000485230 2173 ntTSL 2 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 RNA5SP410-201ENST00000516285 106 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 AC103810.3-201ENST00000583567 96 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CSMD3Q7Z407 MSTO2P-201ENST00000314835 1709 ntBASIC11.4□□□□□ -0.58
CSMD3Q7Z407 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CSMD3Q7Z407 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CSMD3Q7Z407 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CSMD3Q7Z407 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CSMD3Q7Z407 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CSMD3Q7Z407 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CSMD3Q7Z407 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 AL136982.4-201ENST00000437689 1740 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 IGHJ2P-201ENST00000454480 60 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 RN7SL190P-201ENST00000582519 257 ntBASIC11.39□□□□□ -0.59
CSMD3Q7Z407 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.39□□□□□ -0.59
CSMD3Q7Z407 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms