Protein–RNA interactions for Protein: P57073

SOX8, Transcription factor SOX-8, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX8P57073 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX8P57073 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX8P57073 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SOX8P57073 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SOX8P57073 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX8P57073 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.2■□□□□ 0.02
SOX8P57073 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SOX8P57073 AL671710.1-201ENST00000610245 2349 ntBASIC15.2■□□□□ 0.02
SOX8P57073 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.2■□□□□ 0.02
SOX8P57073 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 AC005034.1-201ENST00000426657 489 ntBASIC15.2■□□□□ 0.02
SOX8P57073 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SOX8P57073 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.2■□□□□ 0.02
SOX8P57073 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.2■□□□□ 0.02
SOX8P57073 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.2■□□□□ 0.02
SOX8P57073 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.2■□□□□ 0.02
SOX8P57073 ZNF890P-202ENST00000530367 1156 ntBASIC15.2■□□□□ 0.02
SOX8P57073 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.2■□□□□ 0.02
SOX8P57073 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SOX8P57073 AL035252.4-201ENST00000624174 288 ntBASIC15.2■□□□□ 0.02
SOX8P57073 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SOX8P57073 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SOX8P57073 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 AC067852.2-201ENST00000590513 2313 ntBASIC15.2■□□□□ 0.02
SOX8P57073 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SOX8P57073 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX8P57073 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
SOX8P57073 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SOX8P57073 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 CETN4P-206ENST00000642099 2168 ntBASIC15.19■□□□□ 0.02
SOX8P57073 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.19■□□□□ 0.02
SOX8P57073 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.19■□□□□ 0.02
SOX8P57073 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.19■□□□□ 0.02
SOX8P57073 SPTLC1P1-201ENST00000447199 261 ntBASIC15.19■□□□□ 0.02
SOX8P57073 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.19■□□□□ 0.02
SOX8P57073 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.19■□□□□ 0.02
SOX8P57073 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.19■□□□□ 0.02
SOX8P57073 TEX28P1-201ENST00000613479 1221 ntBASIC15.19■□□□□ 0.02
SOX8P57073 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 TEX28P2-201ENST00000617764 1221 ntBASIC15.19■□□□□ 0.02
SOX8P57073 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SOX8P57073 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SOX8P57073 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 AC092053.1-201ENST00000605787 1936 ntBASIC15.19■□□□□ 0.02
SOX8P57073 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOX8P57073 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
SOX8P57073 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
SOX8P57073 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SOX8P57073 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX8P57073 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.18■□□□□ 0.02
SOX8P57073 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SOX8P57073 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOX8P57073 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOX8P57073 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.18■□□□□ 0.02
SOX8P57073 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SOX8P57073 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms