Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.51■□□□□ 0.07
PER3P56645 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.51■□□□□ 0.07
PER3P56645 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.51■□□□□ 0.07
PER3P56645 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.51■□□□□ 0.07
PER3P56645 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.51■□□□□ 0.07
PER3P56645 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 AL353135.1-201ENST00000606729 504 ntBASIC15.51■□□□□ 0.07
PER3P56645 AL513210.1-201ENST00000629608 234 ntBASIC15.51■□□□□ 0.07
PER3P56645 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
PER3P56645 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.51■□□□□ 0.07
PER3P56645 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
PER3P56645 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.51■□□□□ 0.07
PER3P56645 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.51■□□□□ 0.07
PER3P56645 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 AC009336.1-201ENST00000608941 1553 ntBASIC15.5■□□□□ 0.07
PER3P56645 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
PER3P56645 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PER3P56645 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PER3P56645 PMS2P4-201ENST00000412466 1052 ntBASIC15.5■□□□□ 0.07
PER3P56645 IGLL3P-201ENST00000412472 434 ntBASIC15.5■□□□□ 0.07
PER3P56645 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 RHOQP3-201ENST00000437982 621 ntBASIC15.5■□□□□ 0.07
PER3P56645 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.5■□□□□ 0.07
PER3P56645 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.5■□□□□ 0.07
PER3P56645 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 MIR4745-201ENST00000577608 62 ntBASIC15.5■□□□□ 0.07
PER3P56645 AC091812.2-201ENST00000619081 385 ntBASIC15.5■□□□□ 0.07
PER3P56645 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.5■□□□□ 0.07
PER3P56645 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 AC025580.3-201ENST00000617932 1424 ntBASIC15.5■□□□□ 0.07
PER3P56645 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PER3P56645 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PER3P56645 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.49■□□□□ 0.07
PER3P56645 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.49■□□□□ 0.07
PER3P56645 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.49■□□□□ 0.07
PER3P56645 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PER3P56645 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.49■□□□□ 0.07
PER3P56645 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PER3P56645 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PER3P56645 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.49■□□□□ 0.07
PER3P56645 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PER3P56645 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PER3P56645 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms