Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TFAMP1-201ENST00000412727 736 ntBASIC18.33■□□□□ 0.52
PEX3P56589 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
PEX3P56589 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.33■□□□□ 0.52
PEX3P56589 RPS8P6-201ENST00000426177 609 ntBASIC18.33■□□□□ 0.52
PEX3P56589 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 AC004967.1-201ENST00000453589 447 ntBASIC18.33■□□□□ 0.52
PEX3P56589 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 AL135744.1-201ENST00000565098 629 ntBASIC18.33■□□□□ 0.52
PEX3P56589 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.33■□□□□ 0.52
PEX3P56589 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 AC026120.1-201ENST00000611536 926 ntBASIC18.33■□□□□ 0.52
PEX3P56589 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PEX3P56589 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.33■□□□□ 0.52
PEX3P56589 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PEX3P56589 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEX3P56589 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.32■□□□□ 0.52
PEX3P56589 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.32■□□□□ 0.52
PEX3P56589 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PEX3P56589 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PEX3P56589 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.32■□□□□ 0.52
PEX3P56589 TIMM8BP1-201ENST00000452384 211 ntBASIC18.32■□□□□ 0.52
PEX3P56589 KRT8P48-201ENST00000515599 1220 ntBASIC18.32■□□□□ 0.52
PEX3P56589 FAM86C2P-203ENST00000528684 1004 ntBASIC18.32■□□□□ 0.52
PEX3P56589 GPALPP1-207ENST00000611650 899 ntBASIC18.32■□□□□ 0.52
PEX3P56589 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.32■□□□□ 0.52
PEX3P56589 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PEX3P56589 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PEX3P56589 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
PEX3P56589 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEX3P56589 AC079328.2-201ENST00000561241 3354 ntBASIC18.31■□□□□ 0.52
PEX3P56589 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
PEX3P56589 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.31■□□□□ 0.52
PEX3P56589 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
PEX3P56589 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PEX3P56589 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.31■□□□□ 0.52
PEX3P56589 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PEX3P56589 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.31■□□□□ 0.52
PEX3P56589 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.31■□□□□ 0.52
PEX3P56589 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 SPDYE11-202ENST00000450699 704 ntBASIC18.31■□□□□ 0.52
PEX3P56589 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.31■□□□□ 0.52
PEX3P56589 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
PEX3P56589 SPDYE9P-201ENST00000570642 692 ntBASIC18.31■□□□□ 0.52
PEX3P56589 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.31■□□□□ 0.52
PEX3P56589 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.31■□□□□ 0.52
PEX3P56589 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 SPDYE10P-202ENST00000612005 668 ntBASIC18.31■□□□□ 0.52
PEX3P56589 SPDYE8P-202ENST00000612377 668 ntBASIC18.31■□□□□ 0.52
PEX3P56589 AC105339.1-204ENST00000636249 355 ntBASIC18.31■□□□□ 0.52
PEX3P56589 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.31■□□□□ 0.52
PEX3P56589 GPAA1P2-202ENST00000606848 1787 ntBASIC18.31■□□□□ 0.52
PEX3P56589 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.31■□□□□ 0.52
PEX3P56589 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.31■□□□□ 0.52
PEX3P56589 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
PEX3P56589 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.31■□□□□ 0.52
PEX3P56589 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.31■□□□□ 0.52
PEX3P56589 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.31■□□□□ 0.52
PEX3P56589 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX3P56589 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEX3P56589 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PEX3P56589 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEX3P56589 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 495.3 ms